Sub-dependency update (#4119)

* Updated transient dependencies

* 🐛 Sphinx-autoapi fix

---------

Co-authored-by: james <[email protected]>

Author: fppf-bot

requirements/uv/all.txt

@@ -14,19 +14,19 @@ argon2-cffi==25.1.0
     # via jupyter-server
 argon2-cffi-bindings==25.1.0
     # via argon2-cffi
-arrow==1.3.0
+arrow==1.4.0
     # via isoduration
 asteval==1.0.6
     # via
     #   bluemira (pyproject.toml)
     #   neutronics-material-maker
-astroid==3.3.11
+astroid>=3.3.11
     # via sphinx-autoapi
 asttokens==3.0.0
     # via stack-data
 async-lru==2.0.5
     # via jupyterlab
-attrs==25.3.0
+attrs==25.4.0
     # via
     #   jsonschema
     #   jupyter-cache
@@ -40,9 +40,9 @@ beautifulsoup4==4.14.2
     # via nbconvert
 bleach==6.2.0
     # via nbconvert
-blosc2==3.9.0
+blosc2==3.10.2
     # via tables
-certifi==2025.8.3
+certifi==2025.10.5
     # via
     #   httpcore
     #   httpx
@@ -51,7 +51,7 @@ cffi==2.0.0
     # via argon2-cffi-bindings
 cfgv==3.4.0
     # via pre-commit
-charset-normalizer==3.4.3
+charset-normalizer==3.4.4
     # via requests
 cherab==1.5.0
     # via bluemira (pyproject.toml)
@@ -68,7 +68,7 @@ contourpy==1.3.2
     #   matplotlib
 coolprop==7.1.0
     # via bluemira (pyproject.toml)
-coverage==7.10.7
+coverage==7.11.0
     # via pytest-cov
 cycler==0.12.1
     # via matplotlib
@@ -96,7 +96,7 @@ executing==2.2.1
     # via stack-data
 fastjsonschema==2.21.2
     # via nbformat
-filelock==3.19.1
+filelock==3.20.0
     # via virtualenv
 flexcache==0.3
     # via pint
@@ -120,9 +120,9 @@ httpcore==1.0.9
     # via httpx
 httpx==0.28.1
     # via jupyterlab
-identify==2.6.14
+identify==2.6.15
     # via pre-commit
-idna==3.10
+idna==3.11
     # via
     #   anyio
     #   httpx
@@ -136,9 +136,9 @@ importlib-metadata==8.7.0
     # via
     #   jupyter-cache
     #   myst-nb
-iniconfig==2.1.0
+iniconfig==2.3.0
     # via pytest
-ipykernel==6.30.1
+ipykernel==7.0.1
     # via
     #   jupyterlab
     #   myst-nb
@@ -180,7 +180,7 @@ jupyter-client==8.6.3
     #   ipykernel
     #   jupyter-server
     #   nbclient
-jupyter-core==5.8.1
+jupyter-core==5.9.1
     # via
     #   ipykernel
     #   jupyter-client
@@ -210,13 +210,13 @@ jupyterlab-server==2.27.3
     # via
     #   jupyterlab
     #   notebook
-jupytext==1.17.3
+jupytext==1.18.1
     # via bluemira (pyproject.toml)
 kiwisolver==1.4.9
     # via matplotlib
 lark==1.3.0
     # via rfc3987-syntax
-llvmlite==0.45.0
+llvmlite==0.45.1
     # via numba
 markdown-it-py==3.0.0
     # via
@@ -250,7 +250,7 @@ meshio==5.3.5
     # via bluemira (pyproject.toml)
 mistune==3.1.4
     # via nbconvert
-msgpack==1.1.1
+msgpack==1.1.2
     # via blosc2
 mypy==1.18.2
     # via bluemira (pyproject.toml)
@@ -297,7 +297,7 @@ numba==0.62.1
     #   numba-scipy
 numba-scipy @ git+https://github.com/numba/numba-scipy@23c3b33440ea1fe0f84d05d269fb4a3df4b92787
     # via bluemira (pyproject.toml)
-numexpr==2.13.0
+numexpr==2.14.1
     # via
     #   blosc2
     #   tables
@@ -351,14 +351,14 @@ periodictable==2.0.2
     # via bluemira (pyproject.toml)
 pexpect==4.9.0
     # via ipython
-pillow==11.3.0
+pillow==12.0.0
     # via
     #   imageio
     #   matplotlib
     #   pyvista
 pint==0.24.4
     # via bluemira (pyproject.toml)
-platformdirs==4.4.0
+platformdirs==4.5.0
     # via
     #   blosc2
     #   jupyter-core
@@ -379,7 +379,7 @@ prometheus-client==0.23.1
     # via jupyter-server
 prompt-toolkit==3.0.52
     # via ipython
-psutil==7.1.0
+psutil==7.1.1
     # via ipykernel
 ptyprocess==0.7.0
     # via
@@ -395,9 +395,9 @@ pyclipper==1.3.0.post6
     # via bluemira (pyproject.toml)
 pycparser==2.23
     # via cffi
-pydantic==2.11.9
+pydantic==2.12.3
     # via bluemira (pyproject.toml)
-pydantic-core==2.33.2
+pydantic-core==2.41.4
     # via pydantic
 pygments==2.19.2
     # via
@@ -434,7 +434,7 @@ python-dateutil==2.9.0.post0
     #   jupyter-client
     #   matplotlib
     #   pandas
-python-json-logger==3.3.0
+python-json-logger==4.0.0
     # via jupyter-events
 pytz==2025.2
     # via pandas
@@ -456,7 +456,7 @@ pyzmq==27.1.0
     #   jupyter-server
 raysect==0.8.1.post1
     # via cherab
-referencing==0.36.2
+referencing==0.37.0
     # via
     #   jsonschema
     #   jsonschema-specifications
@@ -477,7 +477,7 @@ rfc3986-validator==0.1.1
     #   jupyter-events
 rfc3987-syntax==1.1.0
     # via jsonschema
-rich==14.1.0
+rich==14.2.0
     # via
     #   bluemira (pyproject.toml)
     #   meshio
@@ -522,7 +522,7 @@ sphinx==8.1.3
     #   sphinx-copybutton
     #   sphinx-rtd-theme
     #   sphinxcontrib-jquery
-sphinx-autoapi==3.6.0
+sphinx-autoapi==3.6.1
     # via bluemira (pyproject.toml)
 sphinx-copybutton==0.5.2
     # via bluemira (pyproject.toml)
@@ -542,7 +542,7 @@ sphinxcontrib-qthelp==2.0.0
     # via sphinx
 sphinxcontrib-serializinghtml==2.0.0
     # via sphinx
-sqlalchemy==2.0.43
+sqlalchemy==2.0.44
     # via jupyter-cache
 stack-data==0.6.3
     # via ipython
@@ -562,7 +562,7 @@ threadpoolctl==3.6.0
     # via scikit-learn
 tinycss2==1.4.0
     # via bleach
-tomli==2.2.1
+tomli==2.3.0
     # via
     #   coverage
     #   jupyterlab
@@ -593,8 +593,6 @@ traitlets==5.14.3
     #   nbformat
 typeguard==4.4.4
     # via bluemira (pyproject.toml)
-types-python-dateutil==2.9.0.20250822
-    # via arrow
 typing-extensions==4.15.0
     # via
     #   anyio
@@ -618,15 +616,17 @@ typing-extensions==4.15.0
     #   typeguard
     #   typing-inspection
     #   virtualenv
-typing-inspection==0.4.1
+typing-inspection==0.4.2
     # via pydantic
 tzdata==2025.2
-    # via pandas
+    # via
+    #   arrow
+    #   pandas
 uri-template==1.3.0
     # via jsonschema
 urllib3==2.5.0
     # via requests
-virtualenv==20.34.0
+virtualenv==20.35.3
     # via pre-commit
 vtk==9.3.1
     # via
@@ -640,7 +640,7 @@ webencodings==0.5.1
     # via
     #   bleach
     #   tinycss2
-websocket-client==1.8.0
+websocket-client==1.9.0
     # via jupyter-server
 zipp==3.23.0
     # via importlib-metadata

requirements/uv/base.txt

@@ -10,11 +10,11 @@ asteval==1.0.6
     #   neutronics-material-maker
 babel==2.17.0
     # via bluemira (pyproject.toml)
-blosc2==3.9.0
+blosc2==3.10.2
     # via tables
-certifi==2025.8.3
+certifi==2025.10.5
     # via requests
-charset-normalizer==3.4.3
+charset-normalizer==3.4.4
     # via requests
 click==8.2.1
     # via
@@ -42,15 +42,15 @@ fortranformat==2.0.3
     #   eqdsk
 gmsh==4.14.1
     # via bluemira (pyproject.toml)
-idna==3.10
+idna==3.11
     # via requests
 imageio==2.37.0
     # via bluemira (pyproject.toml)
 joblib==1.5.2
     # via scikit-learn
 kiwisolver==1.4.9
     # via matplotlib
-llvmlite==0.45.0
+llvmlite==0.45.1
     # via numba
 markdown-it-py==4.0.0
     # via rich
@@ -64,7 +64,7 @@ mdurl==0.1.2
     # via markdown-it-py
 meshio==5.3.5
     # via bluemira (pyproject.toml)
-msgpack==1.1.1
+msgpack==1.1.2
     # via blosc2
 ndindex==1.10.0
     # via blosc2
@@ -78,7 +78,7 @@ numba==0.62.1
     #   numba-scipy
 numba-scipy @ git+https://github.com/numba/numba-scipy@23c3b33440ea1fe0f84d05d269fb4a3df4b92787
     # via bluemira (pyproject.toml)
-numexpr==2.13.0
+numexpr==2.14.1
     # via
     #   blosc2
     #   tables
@@ -110,14 +110,14 @@ pandas==2.3.3
     # via seaborn
 periodictable==2.0.2
     # via bluemira (pyproject.toml)
-pillow==11.3.0
+pillow==12.0.0
     # via
     #   imageio
     #   matplotlib
     #   pyvista
 pint==0.24.4
     # via bluemira (pyproject.toml)
-platformdirs==4.4.0
+platformdirs==4.5.0
     # via
     #   blosc2
     #   pint
@@ -130,9 +130,9 @@ py-cpuinfo==9.0.0
     #   tables
 pyclipper==1.3.0.post6
     # via bluemira (pyproject.toml)
-pydantic==2.11.9
+pydantic==2.12.3
     # via bluemira (pyproject.toml)
-pydantic-core==2.33.2
+pydantic-core==2.41.4
     # via pydantic
 pygments==2.19.2
     # via rich
@@ -152,7 +152,7 @@ requests==2.32.5
     # via
     #   blosc2
     #   pooch
-rich==14.1.0
+rich==14.2.0
     # via
     #   bluemira (pyproject.toml)
     #   meshio
@@ -188,7 +188,7 @@ typing-extensions==4.15.0
     #   tables
     #   typeguard
     #   typing-inspection
-typing-inspection==0.4.1
+typing-inspection==0.4.2
     # via pydantic
 tzdata==2025.2
     # via pandas