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1.3 - Citreous Swordfish

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@sven1103 sven1103 released this 21 Nov 13:42
1.3
3b5da16
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Learn about vigilant mode.

Changes:

  • nf-core create command line interface updated
    • Interactive prompts for required arguments if not given
    • New flag for workflow author
  • Updated channel order for bioconda/conda-forge channels in environment.yaml
  • Increased code coverage for sub command create and licenses
  • Fixed nasty dependency hell issue between pytest and py package in Python 3.4.x
  • Introduced .coveragerc for pytest-cov configuration, which excludes the pipeline template now from being reported
  • Fix 189: Check for given conda and PyPi package dependencies, if their versions exist
  • Added profiles for cfc,binac, uzh that can be synced across pipelines
    • Ordering alphabetically for profiles now
  • Added pip install --upgrade pip to .travis.yml to update pip in the Travis CI environment
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