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src/edt.pyx

Lines changed: 27 additions & 27 deletions
Original file line numberDiff line numberDiff line change
@@ -203,9 +203,9 @@ def sdfsq(
203203

204204
@cython.binding(True)
205205
def edt(
206-
data, anisotropy=None, black_border=False,
207-
int parallel=1, voxel_graph=None, order=None,
208-
):
206+
data, anisotropy=None, black_border=False,
207+
int parallel=1, voxel_graph=None, order=None,
208+
):
209209
"""
210210
Computes the anisotropic Euclidean Distance Transform (EDT) of 1D, 2D, or 3D numpy arrays.
211211
@@ -399,27 +399,27 @@ def edt1dsq(data, anisotropy=1.0, native_bool black_border=False):
399399
return output
400400

401401
def edt2d(
402-
data, anisotropy=(1.0, 1.0),
403-
native_bool black_border=False,
404-
parallel=1, voxel_graph=None
405-
):
402+
data, anisotropy=(1.0, 1.0),
403+
native_bool black_border=False,
404+
parallel=1, voxel_graph=None
405+
):
406406
result = edt2dsq(data, anisotropy, black_border, parallel, voxel_graph)
407407
return np.sqrt(result, result)
408408

409409
def edt2dsq(
410-
data, anisotropy=(1.0, 1.0),
411-
native_bool black_border=False,
412-
parallel=1, voxel_graph=None
413-
):
410+
data, anisotropy=(1.0, 1.0),
411+
native_bool black_border=False,
412+
parallel=1, voxel_graph=None
413+
):
414414
if voxel_graph is not None:
415415
return __edt2dsq_voxel_graph(data, voxel_graph, anisotropy, black_border)
416416
return __edt2dsq(data, anisotropy, black_border, parallel)
417417

418418
def __edt2dsq(
419-
data, anisotropy=(1.0, 1.0),
420-
native_bool black_border=False,
421-
parallel=1
422-
):
419+
data, anisotropy=(1.0, 1.0),
420+
native_bool black_border=False,
421+
parallel=1
422+
):
423423
cdef uint8_t[:,:] arr_memview8
424424
cdef uint16_t[:,:] arr_memview16
425425
cdef uint32_t[:,:] arr_memview32
@@ -620,27 +620,27 @@ def __edt2dsq_voxel_graph(
620620
return output.reshape( data.shape, order=order)
621621

622622
def edt3d(
623-
data, anisotropy=(1.0, 1.0, 1.0),
624-
native_bool black_border=False,
625-
parallel=1, voxel_graph=None
626-
):
623+
data, anisotropy=(1.0, 1.0, 1.0),
624+
native_bool black_border=False,
625+
parallel=1, voxel_graph=None
626+
):
627627
result = edt3dsq(data, anisotropy, black_border, parallel, voxel_graph)
628628
return np.sqrt(result, result)
629629

630630
def edt3dsq(
631-
data, anisotropy=(1.0, 1.0, 1.0),
632-
native_bool black_border=False,
633-
int parallel=1, voxel_graph=None
634-
):
631+
data, anisotropy=(1.0, 1.0, 1.0),
632+
native_bool black_border=False,
633+
int parallel=1, voxel_graph=None
634+
):
635635
if voxel_graph is not None:
636636
return __edt3dsq_voxel_graph(data, voxel_graph, anisotropy, black_border)
637637
return __edt3dsq(data, anisotropy, black_border, parallel)
638638

639639
def __edt3dsq(
640-
data, anisotropy=(1.0, 1.0, 1.0),
641-
native_bool black_border=False,
642-
int parallel=1
643-
):
640+
data, anisotropy=(1.0, 1.0, 1.0),
641+
native_bool black_border=False,
642+
int parallel=1
643+
):
644644
cdef uint8_t[:,:,:] arr_memview8
645645
cdef uint16_t[:,:,:] arr_memview16
646646
cdef uint32_t[:,:,:] arr_memview32

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