v0.9.6

Zarr v0.9.6

Diff since v0.9.5

Merged pull requests:

• Add fill_value_decoding method for disambiguation (#178) (@felixcremer)
• use pipe for 1-byte eltypes (#218) (@bjarthur)
• fix python tests on julia v1.12 (#219) (@bjarthur)
• Make size(arr, tohighdimension) return 1 (#221) (@felixcremer)
• updates for JSON v1 (#222) (@lazarusA)

Closed issues:

• wrong dtype for UInt8 (#214)

v0.9.5

Zarr v0.9.5

Diff since v0.9.4

Merged pull requests:

• CompatHelper: bump compat for AWSS3 to 0.11, (keep existing compat) (#119) (@github-actions[bot])
• Factor out DateTime64 type (#145) (@meggart)
• Throw more informative error for fill_value=nothing (#147) (@felixcremer)
• Document the Storage API in a docstring on AbstractStore (#151) (@asinghvi17)
• Refactor compressors to be in separate files (#153) (@asinghvi17)
• Add more filters (#154) (@asinghvi17)
• Minor verbiage changes to http.jl (#155) (@asinghvi17)
• remove LRUCache.jl from deps (#158) (@bicycle1885)
• Fix the last example in s3examples.md (#160) (@asinghvi17)
• Convert fill values correctly from negative to unsigned integers (#165) (@asinghvi17)
• Add indents for JSON files for readbility (#167) (@calvinchai)
• Bump codecov/codecov-action from 4 to 5 (#169) (@dependabot[bot])
• Fix unit tests (#170) (@meggart)
• Use ChunkCodecLibZlib instead of CodecZlib (#175) (@nhz2)
• Switch from PyCall to PythonCall for testing (#176) (@nhz2)
• Add ZstdCompressor (#180) (@nhz2)
• Fix reading complex type and add basic round trip test (#181) (@nhz2)
• Test against julia pre (#187) (@felixcremer)
• Overload Base.UInt8 explicitly (#188) (@felixcremer)
• CompatHelper: bump compat for ChunkCodecCore to 0.5, (keep existing compat) (#191) (@github-actions[bot])
• CompatHelper: bump compat for ChunkCodecLibZstd to 0.2, (keep existing compat) (#192) (@github-actions[bot])
• Zstd: Don't persist the checksum param if false (#195) (@nhz2)
• Changed sum(.) to reduce(., init=0) in storagesize functions (#198) (@bwalker1)
• Change IOError to ArgumentError in ZGroup.jl (#200) (@bwalker1)
• CompatHelper: bump compat for DataStructures to 0.19, (keep existing compat) (#202) (@github-actions[bot])
• Enable ZArray with eltype Char (#203) (@felixcremer)
• Bump actions/checkout from 4 to 5 (#204) (@dependabot[bot])
• CompatHelper: bump compat for ChunkCodecCore to 0.6, (keep existing compat) (#206) (@github-actions[bot])
• CompatHelper: bump compat for ChunkCodecLibZstd to 0.3, (keep existing compat) (#207) (@github-actions[bot])
• Bump compat for ChunkCodec to 1 (#208) (@nhz2)
• Bump patch version (#210) (@asinghvi17)

Closed issues:

• Zarr.is_zarray with empty string fails on Julia nightly (#143)
• New release with DiskArrays 0.4? (#148)
• ZlibCompressor seems not to respect compression level (#152)
• The zarr-demo s3 bucket appears to have been taken down? (#164)
• Test against julia prerelease (#184)
• Cannot read complex numbers (#190)
• Zstd codec checksum configuration not recognized by TensorStore for Zarr v2 (#193)
• zinfo(z) fails when no chunks of z are initialized (#197)
• Undefined error when trying to write to a non-writeable zgroup (#199)

v0.9.4

Zarr v0.9.4

Diff since v0.9.3

Merged pull requests:

• Update DiskArrays dependency to 0.4 (#140) (@meggart)
• Bump julia-actions/setup-julia from 1 to 2 (#141) (@dependabot[bot])
• Change repo in docs/make.jl to fix deployment (#142) (@felixcremer)

v0.9.3

Zarr v0.9.3

Diff since v0.9.2

Merged pull requests:

• Add read only ZipStore (#123) (@nhz2)
• Fix docs (#136) (@nhz2)
• Update ZipArchives to 2.0 (#138) (@nhz2)

Closed issues:

• missing chunks to be filled with fill values (when server returns HTTP error 403) (#131)

v0.9.2

Zarr v0.9.2

Diff since v0.9.1

Merged pull requests:

• codespell: config, workflow and some typos fixed (#120) (@yarikoptic)
• Fix doc tests and typo in tutorial.md (#121) (@nhz2)
• Update API documentation page (#122) (@ziw-liu)
• Bump actions/checkout from 3 to 4 (#124) (@dependabot[bot])
• Bump actions/cache from 3 to 4 (#132) (@dependabot[bot])
• Bump codecov/codecov-action from 3 to 4 (#133) (@dependabot[bot])
• omit chunks on client HTTP error (like 404, 403,...) (#134) (@Alexander-Barth)

Closed issues:

• Zarr group API is exported but not shown in the documentation (#113)

v0.9.1

Zarr v0.9.1

Diff since v0.9.0

Merged pull requests:

• Dont set connection_limit (#118) (@meggart)

v0.9.0

Zarr v0.9.0

Diff since v0.8.0

Closed issues:

• Change the fill_value from within Julia (#39)
• Very slow S3 read realtive to xarray (#65)
• Reading many Zarr files (https or s3:) causes computer to hang indefinitely (#100)
• Support bitshuffle in BloscCompressor (#102)
• Support for async by default for HTTP/S3/GCS storage? (#105)

Merged pull requests:

• Support bitshuffle in BloscCompressor (#103) (@nhz2)
• Enable async chunk reading (#106) (@meggart)
• enable dependabot for GitHub actions (#107) (@ranocha)
• Bump actions/cache from 1 to 3 (#108) (@dependabot[bot])
• Bump codecov/codecov-action from 1 to 3 (#109) (@dependabot[bot])
• Bump actions/checkout from 2 to 3 (#110) (@dependabot[bot])
• CompatHelper: add new compat entry for OpenSSL at version 1, (keep existing compat) (#114) (@github-actions[bot])
• add support for variable-length strings (#116) (@ilia-kats)
• add support for 0-dimensional arrays/scalars (#117) (@ilia-kats)

v0.8.0

Zarr v0.8.0

Diff since v0.7.3

Closed issues:

• Switch S3Store from AWS.jl to AWSS3.jl (#67)
• Joining the Zarr Implementation council (#88)

Merged pull requests:

• Bump http compat (#94) (@meggart)
• Fill_as_missing (#95) (@meggart)
• CompatHelper: add new compat entry for AWSS3 at version 0.10, (keep existing compat) (#96) (@github-actions[bot])
• Update Project.toml (#101) (@alex-s-gardner)

v0.7.3

Zarr v0.7.3

Diff since v0.7.2

Closed issues:

• size is not type stable (#90)
• Storage not empty error with DictStore (#92)

Merged pull requests:

• make size typestable and test for it (#91) (@gdkrmr)
• Fix dict tree splitting bug (#93) (@meggart)

v0.7.2

Zarr v0.7.2

Diff since v0.7.1

Closed issues:

• Finding an org for Zarr.jl (#25)
• fill_value should provide default value (#79)
• Error appending to empty ragged array (#83)

Merged pull requests:

• Fix docs URL (#81) (@oxinabox)
• Test missings (#84) (@meggart)
• Metadata sanity (#85) (@meggart)
• Fix signatures (#87) (@meggart)