Adding feature to use custom "default_value" as filler for intervals … #17
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…that are not included in the bigwig files. The default is 0.0, which is consistent with the previous behavior. Now any custom value may be used, like cp.nan.
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Thanks for making this update! I just checked and it seems that the behavior is unexpected when the first bin in the batch has missing values in the bigwig. In that case, it seems to return 0 instead of default_value. |
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@mukamel-lab thanks so much for pointing this out. So I still made a mistake somewhere. Need to include a test that simulates this scenario. Will look into it. |
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@mukamel-lab . I am trying to replicate what you are seeing in this PR: #18 . I just don't manage to replicate it (see my comments in the PR). Could you maybe tell me exactly what call you are making, with which parameters? |
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…that are not included in the bigwig files. The default is 0.0, which is consistent with the previous behavior. Now any custom value may be used, like cp.nan.