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1. Bandage Bandage Public

   a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

   C++ 650 108

2. Unicycler Unicycler Public

   hybrid assembly pipeline for bacterial genomes

   C++ 623 137

3. Trycycler Trycycler Public

   A tool for generating consensus long-read assemblies for bacterial genomes

   Python 333 32

4. Badread Badread Public

   a long read simulator that can imitate many types of read problems

   Python 247 24

5. Polypolish Polypolish Public

   a short-read polishing tool for long-read assemblies

   Rust 194 15

6. Autocycler Autocycler Public

   A tool for generating consensus long-read assemblies for bacterial genomes

   Rust 195 17